Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 KRT18P4-201ENST00000422599 1288 ntBASIC15.13■□□□□ 0.01
GPC3P51654 AC041040.1-201ENST00000425197 460 ntBASIC15.13■□□□□ 0.01
GPC3P51654 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 ASS1P2-201ENST00000439895 1223 ntBASIC15.13■□□□□ 0.01
GPC3P51654 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC3P51654 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 AL359219.1-201ENST00000556311 934 ntBASIC15.13■□□□□ 0.01
GPC3P51654 AC141586.1-203ENST00000567242 366 ntBASIC15.13■□□□□ 0.01
GPC3P51654 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.13■□□□□ 0.01
GPC3P51654 AC244250.3-201ENST00000620749 366 ntBASIC15.13■□□□□ 0.01
GPC3P51654 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GPC3P51654 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 AP000244.1-201ENST00000424582 201 ntBASIC15.12■□□□□ 0.01
GPC3P51654 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC3P51654 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 ALG1L3P-201ENST00000503331 765 ntBASIC15.12■□□□□ 0.01
GPC3P51654 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC3P51654 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.12■□□□□ 0.01
GPC3P51654 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC3P51654 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 AC010632.2-201ENST00000588369 1224 ntBASIC15.12■□□□□ 0.01
GPC3P51654 AC126755.5-201ENST00000622756 267 ntBASIC15.12■□□□□ 0.01
GPC3P51654 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 AC020917.4-201ENST00000623994 1999 ntBASIC15.12■□□□□ 0.01
GPC3P51654 AC131212.3-201ENST00000624087 4219 ntBASIC15.12■□□□□ 0.01
GPC3P51654 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC3P51654 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC3P51654 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GPC3P51654 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC3P51654 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 RN7SL351P-201ENST00000469306 248 ntBASIC15.11■□□□□ 0.01
GPC3P51654 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC3P51654 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC3P51654 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms