Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 Z82244.1-201ENST00000631502 840 ntBASIC15.03■□□□□ -0
CPT1AP50416 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CPT1AP50416 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CPT1AP50416 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC15.03■□□□□ -0
CPT1AP50416 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.03■□□□□ -0
CPT1AP50416 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CPT1AP50416 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPT1AP50416 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CPT1AP50416 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.03■□□□□ -0
CPT1AP50416 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.02■□□□□ -0
CPT1AP50416 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 AC027601.5-201ENST00000624065 2482 ntBASIC15.02■□□□□ -0
CPT1AP50416 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.02■□□□□ -0
CPT1AP50416 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CPT1AP50416 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPT1AP50416 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 RN7SKP255-201ENST00000363442 313 ntBASIC15.02■□□□□ -0
CPT1AP50416 RN7SKP203-201ENST00000363618 332 ntBASIC15.02■□□□□ -0
CPT1AP50416 RN7SKP71-201ENST00000364558 318 ntBASIC15.02■□□□□ -0
CPT1AP50416 7SK.1-201ENST00000365328 331 ntBASIC15.02■□□□□ -0
CPT1AP50416 IQCF4-203ENST00000428561 420 ntBASIC15.02■□□□□ -0
CPT1AP50416 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 BRI3P1-201ENST00000440440 378 ntBASIC15.02■□□□□ -0
CPT1AP50416 DPY19L2P4-201ENST00000479881 442 ntBASIC15.02■□□□□ -0
CPT1AP50416 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.02■□□□□ -0
CPT1AP50416 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC15.02■□□□□ -0
CPT1AP50416 AC136475.7-201ENST00000602949 592 ntBASIC15.02■□□□□ -0
CPT1AP50416 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CPT1AP50416 AC009041.4-201ENST00000620075 638 ntBASIC15.02■□□□□ -0
CPT1AP50416 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CPT1AP50416 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.02□□□□□ -0.01
CPT1AP50416 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.02□□□□□ -0.01
CPT1AP50416 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPT1AP50416 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.01□□□□□ -0.01
CPT1AP50416 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.01□□□□□ -0.01
CPT1AP50416 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.01□□□□□ -0.01
CPT1AP50416 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.01□□□□□ -0.01
CPT1AP50416 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.01□□□□□ -0.01
CPT1AP50416 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 AL356653.1-201ENST00000402743 360 ntBASIC15.01□□□□□ -0.01
CPT1AP50416 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPT1AP50416 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC15.01□□□□□ -0.01
CPT1AP50416 MBP-230ENST00000528160 584 ntTSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC15.01□□□□□ -0.01
CPT1AP50416 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms