Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP13P45452 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP13P45452 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP13P45452 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP13P45452 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MMP13P45452 AL133467.4-201ENST00000602953 725 ntBASIC14.33□□□□□ -0.12
MMP13P45452 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP13P45452 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MMP13P45452 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MMP13P45452 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP13P45452 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
MMP13P45452 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 AC004554.1-201ENST00000422830 1468 ntBASIC14.32□□□□□ -0.12
MMP13P45452 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.32□□□□□ -0.12
MMP13P45452 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 OR2K2-202ENST00000374428 1038 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AL583805.1-201ENST00000391389 531 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AL662890.1-201ENST00000396818 632 ntBASIC14.32□□□□□ -0.12
MMP13P45452 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP13P45452 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP13P45452 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP13P45452 DUTP3-201ENST00000450025 415 ntBASIC14.32□□□□□ -0.12
MMP13P45452 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP13P45452 IGHJ2P-201ENST00000454480 60 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP13P45452 AC245884.6-201ENST00000515672 1067 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 AC012044.1-201ENST00000603431 297 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AF254983.2-201ENST00000612331 135 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AC091812.3-201ENST00000621362 345 ntBASIC14.32□□□□□ -0.12
MMP13P45452 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.32□□□□□ -0.12
MMP13P45452 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.32□□□□□ -0.12
MMP13P45452 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 AC012531.1-201ENST00000562848 2680 ntBASIC14.32□□□□□ -0.12
MMP13P45452 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 AL358781.1-202ENST00000321081 1360 ntBASIC14.32□□□□□ -0.12
MMP13P45452 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
MMP13P45452 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 PEG13-201ENST00000631594 5667 ntBASIC14.32□□□□□ -0.12
MMP13P45452 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP13P45452 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP13P45452 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 KRT8P43-201ENST00000406052 1458 ntBASIC14.31□□□□□ -0.12
MMP13P45452 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.31□□□□□ -0.12
MMP13P45452 TNRC18P1-201ENST00000502875 3650 ntBASIC14.31□□□□□ -0.12
MMP13P45452 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
MMP13P45452 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP13P45452 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
MMP13P45452 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.31□□□□□ -0.12
MMP13P45452 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.31□□□□□ -0.12
MMP13P45452 AP000358.1-201ENST00000456260 156 ntBASIC14.31□□□□□ -0.12
MMP13P45452 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms