Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
APOA1P02647 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.31□□□□□ -0.44
APOA1P02647 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOA1P02647 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 INO80-211ENST00000616814 4272 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ACKR1-201ENST00000368121 1240 ntBASIC12.3□□□□□ -0.44
APOA1P02647 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 RN7SKP175-201ENST00000408472 289 ntBASIC12.3□□□□□ -0.44
APOA1P02647 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.3□□□□□ -0.44
APOA1P02647 POM121L8P-201ENST00000417732 1281 ntBASIC12.3□□□□□ -0.44
APOA1P02647 TREML5P-201ENST00000421694 576 ntBASIC12.3□□□□□ -0.44
APOA1P02647 MEP1AP4-201ENST00000423244 1087 ntBASIC12.3□□□□□ -0.44
APOA1P02647 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 AC092580.3-201ENST00000430932 139 ntBASIC12.3□□□□□ -0.44
APOA1P02647 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 POM121L9P-203ENST00000441984 1285 ntBASIC12.3□□□□□ -0.44
APOA1P02647 FDX1P1-201ENST00000449115 551 ntBASIC12.3□□□□□ -0.44
APOA1P02647 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
APOA1P02647 KLF2P3-201ENST00000451977 1087 ntBASIC12.3□□□□□ -0.44
APOA1P02647 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 AC011495.1-201ENST00000498085 584 ntBASIC12.3□□□□□ -0.44
APOA1P02647 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.3□□□□□ -0.44
APOA1P02647 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.3□□□□□ -0.44
APOA1P02647 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.3□□□□□ -0.44
APOA1P02647 AC135586.1-201ENST00000539323 574 ntBASIC12.3□□□□□ -0.44
APOA1P02647 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.3□□□□□ -0.44
APOA1P02647 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 AC009407.1-201ENST00000568958 598 ntBASIC12.3□□□□□ -0.44
APOA1P02647 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.3□□□□□ -0.44
APOA1P02647 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
APOA1P02647 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOA1P02647 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
APOA1P02647 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOA1P02647 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms