Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 TEF-202ENST00000406644 4386 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.9□□□□□ -0.66
IFNA1P01562 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.9□□□□□ -0.66
IFNA1P01562 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 AL512356.2-201ENST00000546955 174 ntBASIC10.9□□□□□ -0.66
IFNA1P01562 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.9□□□□□ -0.66
IFNA1P01562 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.9□□□□□ -0.66
IFNA1P01562 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.9□□□□□ -0.66
IFNA1P01562 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 POM121L7P-201ENST00000329949 2404 ntBASIC10.9□□□□□ -0.66
IFNA1P01562 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.9□□□□□ -0.66
IFNA1P01562 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
IFNA1P01562 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
IFNA1P01562 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
IFNA1P01562 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
IFNA1P01562 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
IFNA1P01562 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
IFNA1P01562 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.9□□□□□ -0.67
IFNA1P01562 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
IFNA1P01562 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC10.9□□□□□ -0.67
IFNA1P01562 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 AL357140.3-201ENST00000639753 1983 ntBASIC10.89□□□□□ -0.67
IFNA1P01562 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
IFNA1P01562 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
IFNA1P01562 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.89□□□□□ -0.67
IFNA1P01562 ALG1L5P-201ENST00000482043 771 ntBASIC10.89□□□□□ -0.67
IFNA1P01562 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
IFNA1P01562 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.89□□□□□ -0.67
IFNA1P01562 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC10.89□□□□□ -0.67
IFNA1P01562 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.89□□□□□ -0.67
IFNA1P01562 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC10.89□□□□□ -0.67
IFNA1P01562 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
IFNA1P01562 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.89□□□□□ -0.67
IFNA1P01562 AC015967.2-201ENST00000624092 234 ntBASIC10.89□□□□□ -0.67
IFNA1P01562 AC006435.4-201ENST00000625037 234 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms