Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 AC244394.1-201ENST00000435000 1665 ntBASIC12.3□□□□□ -0.44
ALX3O95076 NT5C3AP1-202ENST00000441170 1663 ntBASIC12.3□□□□□ -0.44
ALX3O95076 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 ACTBP11-201ENST00000436287 1126 ntBASIC12.3□□□□□ -0.44
ALX3O95076 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ALX3O95076 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.3□□□□□ -0.44
ALX3O95076 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.3□□□□□ -0.44
ALX3O95076 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
ALX3O95076 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.3□□□□□ -0.44
ALX3O95076 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.3□□□□□ -0.44
ALX3O95076 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 Z98259.2-201ENST00000641583 609 ntBASIC12.3□□□□□ -0.44
ALX3O95076 STRCP1-201ENST00000509801 5328 ntBASIC12.3□□□□□ -0.44
ALX3O95076 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.3□□□□□ -0.44
ALX3O95076 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 EGLN3-205ENST00000547327 2849 ntBASIC12.3□□□□□ -0.44
ALX3O95076 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.3□□□□□ -0.44
ALX3O95076 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALX3O95076 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
ALX3O95076 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 RPL13AP3-202ENST00000494676 1473 ntBASIC12.29□□□□□ -0.44
ALX3O95076 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ALX3O95076 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ALX3O95076 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.29□□□□□ -0.44
ALX3O95076 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.29□□□□□ -0.44
ALX3O95076 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC12.29□□□□□ -0.44
ALX3O95076 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.29□□□□□ -0.44
ALX3O95076 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.29□□□□□ -0.44
ALX3O95076 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.29□□□□□ -0.44
ALX3O95076 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.29□□□□□ -0.44
ALX3O95076 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALX3O95076 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.29□□□□□ -0.44
ALX3O95076 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.29□□□□□ -0.44
ALX3O95076 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms