Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
O00370 AL118506.1-201ENST00000601296 3082 ntBASIC14.68□□□□□ -0.06
O00370 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
O00370 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
O00370 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.68□□□□□ -0.06
O00370 STK24P1-201ENST00000455035 1291 ntBASIC14.68□□□□□ -0.06
O00370 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.68□□□□□ -0.06
O00370 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.68□□□□□ -0.06
O00370 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
O00370 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
O00370 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.68□□□□□ -0.06
O00370 HERC2P11-201ENST00000562845 725 ntBASIC14.68□□□□□ -0.06
O00370 AC100756.2-201ENST00000569537 736 ntBASIC14.68□□□□□ -0.06
O00370 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.68□□□□□ -0.06
O00370 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.68□□□□□ -0.06
O00370 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.68□□□□□ -0.06
O00370 AC012073.1-201ENST00000606114 1108 ntBASIC14.68□□□□□ -0.06
O00370 AC025262.2-201ENST00000623975 1056 ntBASIC14.68□□□□□ -0.06
O00370 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.68□□□□□ -0.06
O00370 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
O00370 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.68□□□□□ -0.06
O00370 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
O00370 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.68□□□□□ -0.06
O00370 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
O00370 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
O00370 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
O00370 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
O00370 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 LINC00567-201ENST00000569854 3409 ntBASIC14.67□□□□□ -0.06
O00370 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.67□□□□□ -0.06
O00370 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.67□□□□□ -0.06
O00370 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
O00370 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
O00370 PRSS3P1-201ENST00000503996 742 ntBASIC14.67□□□□□ -0.06
O00370 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.67□□□□□ -0.06
O00370 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.67□□□□□ -0.06
O00370 AC007881.3-201ENST00000608897 607 ntBASIC14.67□□□□□ -0.06
O00370 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.67□□□□□ -0.06
O00370 AC242376.2-201ENST00000619355 883 ntBASIC14.67□□□□□ -0.06
O00370 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
O00370 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
O00370 MKRN5P-201ENST00000445263 1467 ntBASIC14.67□□□□□ -0.06
O00370 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.67□□□□□ -0.06
O00370 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 POM121L14P-201ENST00000406100 1558 ntBASIC14.67□□□□□ -0.06
O00370 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
O00370 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.67□□□□□ -0.06
O00370 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
O00370 AP003969.2-201ENST00000623739 2275 ntBASIC14.67□□□□□ -0.06
O00370 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.67□□□□□ -0.06
O00370 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
O00370 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.66□□□□□ -0.06
O00370 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
O00370 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
O00370 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
O00370 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
O00370 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
O00370 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
O00370 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
O00370 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms