Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DUX4Q9UBX2 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
DUX4Q9UBX2 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
DUX4Q9UBX2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
DUX4Q9UBX2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DUX4Q9UBX2 AL512791.2-201ENST00000615251 4609 ntBASIC12.25□□□□□ -0.45
DUX4Q9UBX2 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.24□□□□□ -0.45
DUX4Q9UBX2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 RN7SL219P-201ENST00000582872 296 ntBASIC12.24□□□□□ -0.45
DUX4Q9UBX2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AL162426.1-201ENST00000624141 743 ntBASIC12.24□□□□□ -0.45
DUX4Q9UBX2 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.24□□□□□ -0.45
DUX4Q9UBX2 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AOC4P-203ENST00000566825 2289 ntBASIC12.23□□□□□ -0.45
DUX4Q9UBX2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AL391647.1-201ENST00000395664 511 ntBASIC12.23□□□□□ -0.45
DUX4Q9UBX2 MIR663B-201ENST00000408361 115 ntBASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 RNMTL1P1-201ENST00000454103 560 ntBASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 AC092658.1-201ENST00000505836 891 ntBASIC12.23□□□□□ -0.45
DUX4Q9UBX2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.23□□□□□ -0.45
DUX4Q9UBX2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms