Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AL359219.1-201ENST00000556311 934 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC008972.2-201ENST00000606587 494 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC026120.2-201ENST00000617239 309 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AC002472.4-201ENST00000641915 272 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 PPT1-213ENST00000641319 2388 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 LINC00638-201ENST00000555578 2518 ntBASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
HMG20BQ9P0W2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AL355102.3-201ENST00000554299 1678 ntBASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 RN7SL582P-201ENST00000491078 279 ntBASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AC132812.1-201ENST00000583145 892 ntBASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 AC126755.5-201ENST00000622756 267 ntBASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMG20BQ9P0W2 ZNF493-208ENST00000599461 1769 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 AC005014.1-201ENST00000432006 2976 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 AP000354.1-201ENST00000396982 456 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 RN7SL494P-201ENST00000461517 304 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 AC090136.2-201ENST00000517809 420 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 BAK1P2-201ENST00000532665 631 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 C2orf69P1-201ENST00000563532 1093 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMG20BQ9P0W2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms