Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PARPBPQ9NWS1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 MAPK10-262ENST00000641051 5738 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 ERP29P1-201ENST00000442902 706 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC105129.2-201ENST00000559536 390 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 MIR4265-201ENST00000582152 99 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC138761.6-201ENST00000583997 1423 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AP005264.5-201ENST00000590066 467 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AL133499.1-201ENST00000596207 608 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC005632.3-201ENST00000605544 308 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC087392.5-201ENST00000612517 489 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AC068587.10-201ENST00000641210 219 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AGAP10P-201ENST00000454844 2418 ntBASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PARPBPQ9NWS1 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 MIR1307-201ENST00000408840 149 ntBASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms