Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC152010.1-201ENST00000415779 2006 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC026320.2-201ENST00000434379 478 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 OR2R1P-201ENST00000441404 914 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC114947.1-202ENST00000514136 344 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 OR4A19P-201ENST00000533579 1103 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC105129.2-201ENST00000559536 390 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 MIR3907-201ENST00000579424 151 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 RN7SL574P-201ENST00000581512 297 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AL157392.4-201ENST00000609756 345 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AL354702.1-201ENST00000442006 1960 ntBASIC12.63□□□□□ -0.39
USB1Q9BQ65 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.63□□□□□ -0.39
USB1Q9BQ65 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USB1Q9BQ65 AC064801.2-201ENST00000625052 1303 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms