Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC005520.3-201ENST00000602874 370 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AL357094.1-201ENST00000603845 844 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC244669.2-201ENST00000612320 853 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC093783.1-201ENST00000612976 329 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 GHET1-201ENST00000627071 1906 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 AC005014.1-201ENST00000432006 2976 ntBASIC12.84□□□□□ -0.35
HPS1Q92902 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 AL358933.1-201ENST00000565046 2830 ntBASIC12.84□□□□□ -0.35
HPS1Q92902 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC020658.4-201ENST00000613987 684 ntBASIC12.84□□□□□ -0.35
HPS1Q92902 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
HPS1Q92902 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HPS1Q92902 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.84□□□□□ -0.35
HPS1Q92902 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HPS1Q92902 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.83□□□□□ -0.35
HPS1Q92902 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.83□□□□□ -0.35
HPS1Q92902 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
HPS1Q92902 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.83□□□□□ -0.35
HPS1Q92902 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
HPS1Q92902 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.83□□□□□ -0.35
HPS1Q92902 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.83□□□□□ -0.36
HPS1Q92902 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.83□□□□□ -0.36
HPS1Q92902 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
HPS1Q92902 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.83□□□□□ -0.36
HPS1Q92902 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HPS1Q92902 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HPS1Q92902 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HPS1Q92902 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.83□□□□□ -0.36
HPS1Q92902 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms