Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 CYP4F60P-201ENST00000439449 549 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC079944.2-201ENST00000478867 734 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 AL137779.3-201ENST00000553295 729 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SRSF9P1-201ENST00000399149 530 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 BCRP5-201ENST00000514371 253 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 IGHV1OR16-3-201ENST00000568138 205 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AFMID-205ENST00000586731 550 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC090950.1-202ENST00000605733 644 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC109326.1-201ENST00000624705 1321 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AGAP12P-201ENST00000585227 2359 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 KRT8P5-201ENST00000592443 1458 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 AC108673.2-201ENST00000608909 565 ntBASIC8.77□□□□□ -1
VPS13DQ5THJ4 UBR1-212ENST00000627960 189 ntTSL 5 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
VPS13DQ5THJ4 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
VPS13DQ5THJ4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 GGT8P-201ENST00000418938 532 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 VDAC1P13-201ENST00000447826 859 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC078880.3-201ENST00000603439 1121 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC026271.4-201ENST00000578214 1833 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MRPS16P3-201ENST00000415961 374 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 DNM1P48-201ENST00000419538 439 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms