Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SSR1P43307 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 AL591122.2-201ENST00000624125 1853 ntBASIC14.78□□□□□ -0.04
SSR1P43307 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR1P43307 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 AC011742.3-201ENST00000439053 820 ntBASIC14.78□□□□□ -0.04
SSR1P43307 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 RCC2P8-201ENST00000502779 1035 ntBASIC14.78□□□□□ -0.04
SSR1P43307 CHCHD2P2-201ENST00000503744 321 ntBASIC14.78□□□□□ -0.04
SSR1P43307 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR1P43307 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR1P43307 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 AL132994.2-201ENST00000603120 687 ntBASIC14.78□□□□□ -0.04
SSR1P43307 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR1P43307 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 AC083964.2-201ENST00000623988 2396 ntBASIC14.78□□□□□ -0.04
SSR1P43307 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSR1P43307 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SSR1P43307 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR1P43307 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSR1P43307 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR1P43307 FMO6P-201ENST00000236166 1620 ntBASIC14.77□□□□□ -0.04
SSR1P43307 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.77□□□□□ -0.04
SSR1P43307 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR1P43307 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
SSR1P43307 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.77□□□□□ -0.04
SSR1P43307 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR1P43307 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.77□□□□□ -0.04
SSR1P43307 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR1P43307 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR1P43307 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR1P43307 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR1P43307 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR1P43307 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR1P43307 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 AC044849.1-201ENST00000519737 1188 ntBASIC14.77□□□□□ -0.05
SSR1P43307 AC126915.1-201ENST00000522847 1038 ntBASIC14.77□□□□□ -0.05
SSR1P43307 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.77□□□□□ -0.05
SSR1P43307 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR1P43307 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.77□□□□□ -0.05
SSR1P43307 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 MIR3615-201ENST00000581999 87 ntBASIC14.77□□□□□ -0.05
SSR1P43307 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 303.8 ms