Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AL353637.1-201ENST00000451571 732 ntBASIC14.41□□□□□ -0.1
SLC1A1P43005 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AP001258.2-201ENST00000529891 490 ntBASIC14.41□□□□□ -0.1
SLC1A1P43005 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A1P43005 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A1P43005 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AC020914.3-201ENST00000594712 304 ntBASIC14.41□□□□□ -0.1
SLC1A1P43005 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A1P43005 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 AC007336.3-201ENST00000623886 2160 ntBASIC14.41□□□□□ -0.1
SLC1A1P43005 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A1P43005 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 TNRC18P1-201ENST00000502875 3650 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC1A1P43005 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC1A1P43005 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 ACTBP11-201ENST00000436287 1126 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 AC005077.3-201ENST00000449614 213 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 RN7SL258P-201ENST00000478664 300 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 RPL18AP8-201ENST00000486071 528 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC1A1P43005 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC1A1P43005 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC1A1P43005 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC1A1P43005 AL359881.2-201ENST00000602973 570 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC1A1P43005 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC1A1P43005 TEKT4P2-202ENST00000559466 1312 ntBASIC14.4□□□□□ -0.1
SLC1A1P43005 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.4□□□□□ -0.11
SLC1A1P43005 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 STRCP1-201ENST00000509801 5328 ntBASIC14.39□□□□□ -0.11
SLC1A1P43005 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC1A1P43005 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
SLC1A1P43005 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms