Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.69□□□□□ -0.38
RFC3P40938 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.69□□□□□ -0.38
RFC3P40938 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.69□□□□□ -0.38
RFC3P40938 AL118522.1-201ENST00000611368 560 ntBASIC12.69□□□□□ -0.38
RFC3P40938 AC138466.5-201ENST00000624002 808 ntBASIC12.69□□□□□ -0.38
RFC3P40938 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RFC3P40938 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 AC011474.4-201ENST00000623523 2076 ntBASIC12.69□□□□□ -0.38
RFC3P40938 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RFC3P40938 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 CTBP2P8-201ENST00000422584 1330 ntBASIC12.68□□□□□ -0.38
RFC3P40938 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 OR7E115P-201ENST00000382617 1024 ntBASIC12.68□□□□□ -0.38
RFC3P40938 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 ACTG1P19-201ENST00000418987 1116 ntBASIC12.68□□□□□ -0.38
RFC3P40938 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 AC093909.3-201ENST00000504783 336 ntBASIC12.68□□□□□ -0.38
RFC3P40938 ALG1L6P-201ENST00000515248 758 ntBASIC12.68□□□□□ -0.38
RFC3P40938 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.68□□□□□ -0.38
RFC3P40938 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 AC010976.2-201ENST00000609697 852 ntBASIC12.68□□□□□ -0.38
RFC3P40938 AC011471.3-201ENST00000623576 402 ntBASIC12.68□□□□□ -0.38
RFC3P40938 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 AC111170.3-201ENST00000624282 2464 ntBASIC12.68□□□□□ -0.38
RFC3P40938 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.68□□□□□ -0.38
RFC3P40938 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.68□□□□□ -0.38
RFC3P40938 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFC3P40938 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RFC3P40938 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms