Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL591499.1-201ENST00000307155 1153 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 RN7SKP255-201ENST00000363442 313 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 RN7SKP203-201ENST00000363618 332 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 RN7SKP71-201ENST00000364558 318 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 7SK.1-201ENST00000365328 331 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 MARCKSL1P2-201ENST00000401037 976 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC16.72■□□□□ 0.27
PDE6BP35913 POLR2LP1-206ENST00000444785 187 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.72■□□□□ 0.27
PDE6BP35913 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.72■□□□□ 0.27
PDE6BP35913 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC16.72■□□□□ 0.27
PDE6BP35913 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC16.72■□□□□ 0.27
PDE6BP35913 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC16.72■□□□□ 0.27
PDE6BP35913 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDE6BP35913 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDE6BP35913 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDE6BP35913 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.71■□□□□ 0.27
PDE6BP35913 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PDE6BP35913 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.71■□□□□ 0.27
PDE6BP35913 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 RNA5SP84-201ENST00000364740 107 ntBASIC16.71■□□□□ 0.27
PDE6BP35913 OR2T32P-201ENST00000403423 963 ntBASIC16.71■□□□□ 0.27
PDE6BP35913 AKR1C6P-201ENST00000432950 983 ntBASIC16.71■□□□□ 0.27
PDE6BP35913 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC16.71■□□□□ 0.27
PDE6BP35913 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC16.71■□□□□ 0.27
PDE6BP35913 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.71■□□□□ 0.27
PDE6BP35913 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 NAT9-204ENST00000578822 839 ntTSL 3 BASIC16.71■□□□□ 0.27
PDE6BP35913 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.71■□□□□ 0.27
PDE6BP35913 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 CA6-205ENST00000480186 1493 ntTSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
PDE6BP35913 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC16.71■□□□□ 0.27
PDE6BP35913 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDE6BP35913 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDE6BP35913 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.71■□□□□ 0.26
PDE6BP35913 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDE6BP35913 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDE6BP35913 RPL4P6-201ENST00000438116 1304 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.7■□□□□ 0.26
PDE6BP35913 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.7■□□□□ 0.26
PDE6BP35913 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDE6BP35913 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 AC024475.2-201ENST00000312173 879 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 SNORA30.1-201ENST00000363193 129 ntBASIC16.7■□□□□ 0.26
PDE6BP35913 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6BP35913 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms