Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TRMT112P3-201ENST00000580149 358 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 AC127024.7-201ENST00000625101 200 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.46■□□□□ 0.23
POLR3DP05423 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 AC073548.1-201ENST00000624088 1882 ntBASIC16.46■□□□□ 0.22
POLR3DP05423 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
POLR3DP05423 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 AGAP12P-201ENST00000585227 2359 ntBASIC16.45■□□□□ 0.22
POLR3DP05423 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
POLR3DP05423 ABCD1P4-201ENST00000399687 604 ntBASIC16.45■□□□□ 0.22
POLR3DP05423 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.45■□□□□ 0.22
POLR3DP05423 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.45■□□□□ 0.22
POLR3DP05423 RN7SL556P-201ENST00000582856 298 ntBASIC16.45■□□□□ 0.22
POLR3DP05423 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.45■□□□□ 0.22
POLR3DP05423 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.45■□□□□ 0.22
POLR3DP05423 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR3DP05423 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 NCLP1-201ENST00000445357 1963 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 AC005562.1-201ENST00000583030 3219 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 AL031595.1-201ENST00000623969 4709 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 AP000354.1-201ENST00000396982 456 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 GGTLC4P-201ENST00000402176 664 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 ACTBP14-201ENST00000411655 1089 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 AC007279.1-201ENST00000448547 837 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.44■□□□□ 0.22
POLR3DP05423 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 AC093909.3-201ENST00000504783 336 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR3DP05423 AC013553.1-201ENST00000560906 267 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.44■□□□□ 0.22
POLR3DP05423 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 AC006158.1-201ENST00000610661 249 ntBASIC16.44■□□□□ 0.22
POLR3DP05423 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR3DP05423 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR3DP05423 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms