Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC1P02654 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 BX679664.3-201ENST00000414070 555 ntBASIC12.29□□□□□ -0.44
APOC1P02654 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC1P02654 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 AC104073.2-201ENST00000453737 312 ntBASIC12.29□□□□□ -0.44
APOC1P02654 AC113935.1-201ENST00000471722 555 ntBASIC12.29□□□□□ -0.44
APOC1P02654 RN7SL277P-201ENST00000481521 288 ntBASIC12.29□□□□□ -0.44
APOC1P02654 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC1P02654 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 HERC2P10-201ENST00000570209 2393 ntBASIC12.29□□□□□ -0.44
APOC1P02654 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 MIR497HG-202ENST00000572453 3838 ntBASIC12.29□□□□□ -0.44
APOC1P02654 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC1P02654 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC1P02654 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC1P02654 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 FAM95B1-212ENST00000592873 4692 ntBASIC12.28□□□□□ -0.44
APOC1P02654 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 MKRN5P-201ENST00000445263 1467 ntBASIC12.28□□□□□ -0.44
APOC1P02654 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 AC007614.5-201ENST00000623424 8892 ntBASIC12.28□□□□□ -0.44
APOC1P02654 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
APOC1P02654 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
APOC1P02654 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.28□□□□□ -0.44
APOC1P02654 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 AC136604.1-202ENST00000425471 771 ntBASIC12.28□□□□□ -0.44
APOC1P02654 ATP5G2P4-201ENST00000442175 420 ntBASIC12.28□□□□□ -0.44
APOC1P02654 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 MIR3615-201ENST00000581999 87 ntBASIC12.28□□□□□ -0.44
APOC1P02654 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 AL157813.1-201ENST00000612996 587 ntBASIC12.28□□□□□ -0.44
APOC1P02654 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms