Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 AC104564.3-201ENST00000582367 638 ntBASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 AL139125.2-201ENST00000623134 1869 ntBASIC22.05■■□□□ 1.12
HS3ST3A1Q9Y663 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 MIR572-201ENST00000384983 95 ntBASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.04■■□□□ 1.12
HS3ST3A1Q9Y663 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 AC010525.1-201ENST00000585559 441 ntBASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 AL358852.1-201ENST00000623174 1268 ntBASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HS3ST3A1Q9Y663 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 AP005435.1-201ENST00000529293 1178 ntBASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HS3ST3A1Q9Y663 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
HS3ST3A1Q9Y663 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
HS3ST3A1Q9Y663 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 NME4-202ENST00000382940 766 ntTSL 3 BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 AC004812.2-201ENST00000611079 2094 ntBASIC22■■□□□ 1.11
HS3ST3A1Q9Y663 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HS3ST3A1Q9Y663 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 AL162430.1-201ENST00000480705 870 ntBASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HS3ST3A1Q9Y663 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms