Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA2Q9Y5H9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA2Q9Y5H9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 AC006455.2-201ENST00000429931 906 ntBASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA2Q9Y5H9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 AC105265.2-201ENST00000467189 838 ntBASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA2Q9Y5H9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 AC009086.3-201ENST00000623486 1008 ntBASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 AC136469.2-201ENST00000623944 1028 ntBASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA2Q9Y5H9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 DUSP8P5-201ENST00000422884 1815 ntBASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 RASA4CP-201ENST00000424092 1398 ntBASIC25.04■■□□□ 1.6
PCDHA2Q9Y5H9 AC092068.2-201ENST00000590491 1708 ntBASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 MIR3181-201ENST00000578512 73 ntBASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA2Q9Y5H9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 CA15P2-201ENST00000611168 834 ntBASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA2Q9Y5H9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 AC027682.1-201ENST00000562846 899 ntBASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 RARRES2P6-201ENST00000567333 442 ntBASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA2Q9Y5H9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA2Q9Y5H9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms