Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB1Q9Y5G3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGB1Q9Y5G3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB1Q9Y5G3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB1Q9Y5G3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB1Q9Y5G3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 AC026310.3-201ENST00000625186 2373 ntBASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 AL592295.1-201ENST00000400984 884 ntBASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB1Q9Y5G3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB1Q9Y5G3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 RPS2P7-201ENST00000447334 885 ntBASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB1Q9Y5G3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 AL121603.2-201ENST00000557373 2117 ntBASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB1Q9Y5G3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 PKD1P6-201ENST00000343738 4769 ntBASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB1Q9Y5G3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 AL022069.1-201ENST00000568025 1636 ntBASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms