Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB1Q9Y5F3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 AC105265.2-201ENST00000467189 838 ntBASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 AC104564.3-201ENST00000582367 638 ntBASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB1Q9Y5F3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
PCDHB1Q9Y5F3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 DUSP8P3-201ENST00000399571 1760 ntBASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHB1Q9Y5F3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 AF213884.3-201ENST00000563833 479 ntBASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB1Q9Y5F3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB1Q9Y5F3 AC079630.1-202ENST00000618127 1840 ntBASIC22.27■■□□□ 1.15
PCDHB1Q9Y5F3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 AL136967.2-201ENST00000623968 743 ntBASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB1Q9Y5F3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
PCDHB1Q9Y5F3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHB1Q9Y5F3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB1Q9Y5F3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDHB1Q9Y5F3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDHB1Q9Y5F3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB1Q9Y5F3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHB1Q9Y5F3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms