Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4S1Q9Y587 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 RAP2CP1-202ENST00000605179 643 ntBASIC21.06■□□□□ 0.96
AP4S1Q9Y587 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 AC079630.1-202ENST00000618127 1840 ntBASIC21.06■□□□□ 0.96
AP4S1Q9Y587 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4S1Q9Y587 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 AC026310.3-201ENST00000625186 2373 ntBASIC21.05■□□□□ 0.96
AP4S1Q9Y587 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.05■□□□□ 0.96
AP4S1Q9Y587 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 AC026202.3-201ENST00000600805 1127 ntBASIC21.04■□□□□ 0.96
AP4S1Q9Y587 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 AC080038.3-201ENST00000623346 1952 ntBASIC21.04■□□□□ 0.96
AP4S1Q9Y587 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4S1Q9Y587 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.03■□□□□ 0.96
AP4S1Q9Y587 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
AP4S1Q9Y587 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4S1Q9Y587 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4S1Q9Y587 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4S1Q9Y587 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
AP4S1Q9Y587 AC007029.1-201ENST00000604183 313 ntBASIC21.02■□□□□ 0.96
AP4S1Q9Y587 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP4S1Q9Y587 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP4S1Q9Y587 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP4S1Q9Y587 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
AP4S1Q9Y587 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4S1Q9Y587 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP4S1Q9Y587 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21■□□□□ 0.95
AP4S1Q9Y587 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21■□□□□ 0.95
AP4S1Q9Y587 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms