Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP50Q9UKX7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP50Q9UKX7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NUP50Q9UKX7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP50Q9UKX7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 FOXO3B-201ENST00000395675 1928 ntBASIC19.31■□□□□ 0.68
NUP50Q9UKX7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 KRT16P3-201ENST00000439127 1283 ntBASIC19.31■□□□□ 0.68
NUP50Q9UKX7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 AC021242.3-201ENST00000607598 1377 ntBASIC19.31■□□□□ 0.68
NUP50Q9UKX7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP50Q9UKX7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 AL137060.1-201ENST00000618151 2648 ntBASIC19.3■□□□□ 0.68
NUP50Q9UKX7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 UNC93B8-201ENST00000511903 705 ntBASIC19.3■□□□□ 0.68
NUP50Q9UKX7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 AC073130.3-201ENST00000624389 2278 ntBASIC19.3■□□□□ 0.68
NUP50Q9UKX7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUP50Q9UKX7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 AC008406.3-201ENST00000620001 1374 ntBASIC19.29■□□□□ 0.68
NUP50Q9UKX7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.29■□□□□ 0.68
NUP50Q9UKX7 LINC00526-201ENST00000581067 1875 ntBASIC19.28■□□□□ 0.68
NUP50Q9UKX7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 TSPY9P-201ENST00000440215 945 ntBASIC19.28■□□□□ 0.68
NUP50Q9UKX7 TSPY11P-201ENST00000442607 1045 ntBASIC19.28■□□□□ 0.68
NUP50Q9UKX7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 MIR4281-201ENST00000580852 62 ntBASIC19.28■□□□□ 0.68
NUP50Q9UKX7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.28■□□□□ 0.68
NUP50Q9UKX7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUP50Q9UKX7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 AC011551.1-201ENST00000614101 683 ntBASIC19.27■□□□□ 0.68
NUP50Q9UKX7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP50Q9UKX7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.27■□□□□ 0.67
NUP50Q9UKX7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 AC092028.1-203ENST00000608262 953 ntBASIC19.26■□□□□ 0.67
NUP50Q9UKX7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms