Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPSF2Q9P2I0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CPSF2Q9P2I0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.33■■□□□ 1.16
CPSF2Q9P2I0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.33■■□□□ 1.16
CPSF2Q9P2I0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 TSPY13P-201ENST00000338964 914 ntBASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.32■■□□□ 1.16
CPSF2Q9P2I0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 AC074183.2-201ENST00000623112 922 ntBASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF2Q9P2I0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 THA1P-201ENST00000590384 1145 ntBASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.3■■□□□ 1.16
CPSF2Q9P2I0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.29■■□□□ 1.16
CPSF2Q9P2I0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 MIR4281-201ENST00000580852 62 ntBASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF2Q9P2I0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 AF131216.4-201ENST00000638924 1588 ntBASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF2Q9P2I0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.27■■□□□ 1.15
CPSF2Q9P2I0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CPSF2Q9P2I0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 KRT18P24-201ENST00000344739 1156 ntBASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF2Q9P2I0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.25■■□□□ 1.15
CPSF2Q9P2I0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 454.1 ms