Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.33■□□□□ 0.85
MRPL39Q9NYK5 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL39Q9NYK5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 AL117328.2-201ENST00000624617 1940 ntBASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 AC009299.2-201ENST00000482477 511 ntBASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 AC092028.1-203ENST00000608262 953 ntBASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL39Q9NYK5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 AL451085.2-201ENST00000605085 799 ntBASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MRPL39Q9NYK5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 AL024507.2-201ENST00000606070 2574 ntBASIC20.3■□□□□ 0.84
MRPL39Q9NYK5 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 MIR4787-201ENST00000607364 84 ntBASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL39Q9NYK5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 AC239859.2-201ENST00000444165 318 ntBASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL39Q9NYK5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms