Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HCFC1R1Q9NWW0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
HCFC1R1Q9NWW0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.39■■□□□ 1.34
HCFC1R1Q9NWW0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 AC090192.1-201ENST00000517740 490 ntBASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 AC092437.1-201ENST00000624794 1048 ntBASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 RARRES2P11-201ENST00000635158 484 ntBASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 FP325331.1-202ENST00000623531 1380 ntBASIC23.39■■□□□ 1.33
HCFC1R1Q9NWW0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 AC123595.1-201ENST00000440769 1046 ntBASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 OR2I1P-207ENST00000453522 948 ntBASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.38■■□□□ 1.33
HCFC1R1Q9NWW0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 CCDC92B-201ENST00000575506 885 ntBASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 AL354811.1-201ENST00000610286 706 ntBASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.37■■□□□ 1.33
HCFC1R1Q9NWW0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 AL137784.2-201ENST00000607332 1000 ntBASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HCFC1R1Q9NWW0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 AC144652.1-201ENST00000609974 1624 ntBASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCFC1R1Q9NWW0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC1R1Q9NWW0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms