Protein–RNA interactions for Protein: Q9NUN7

ACER3, Alkaline ceramidase 3, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3Q9NUN7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ACER3Q9NUN7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 MIR4787-201ENST00000607364 84 ntBASIC20.73■□□□□ 0.91
ACER3Q9NUN7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACER3Q9NUN7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ACER3Q9NUN7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACER3Q9NUN7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ACER3Q9NUN7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 AC079630.1-202ENST00000618127 1840 ntBASIC20.7■□□□□ 0.9
ACER3Q9NUN7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
ACER3Q9NUN7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 AL035685.1-201ENST00000636663 812 ntBASIC20.7■□□□□ 0.9
ACER3Q9NUN7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACER3Q9NUN7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.69■□□□□ 0.9
ACER3Q9NUN7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.69■□□□□ 0.9
ACER3Q9NUN7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
ACER3Q9NUN7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.67■□□□□ 0.9
ACER3Q9NUN7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms