Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ECHDC1Q9NTX5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ECHDC1Q9NTX5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ECHDC1Q9NTX5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.28■■□□□ 1.96
ECHDC1Q9NTX5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ECHDC1Q9NTX5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 AC006455.2-201ENST00000429931 906 ntBASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ECHDC1Q9NTX5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 AC009086.3-201ENST00000623486 1008 ntBASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ECHDC1Q9NTX5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.25■■□□□ 1.95
ECHDC1Q9NTX5 AC008406.3-201ENST00000620001 1374 ntBASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ECHDC1Q9NTX5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ECHDC1Q9NTX5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.22■■□□□ 1.95
ECHDC1Q9NTX5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 AC092171.4-201ENST00000609130 632 ntBASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.21■■□□□ 1.95
ECHDC1Q9NTX5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
ECHDC1Q9NTX5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ECHDC1Q9NTX5 AL499627.2-201ENST00000606283 725 ntBASIC27.2■■□□□ 1.94
ECHDC1Q9NTX5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 C9orf163-202ENST00000624034 2573 ntBASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.19■■□□□ 1.94
ECHDC1Q9NTX5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ECHDC1Q9NTX5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ECHDC1Q9NTX5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.17■■□□□ 1.94
ECHDC1Q9NTX5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.17■■□□□ 1.94
ECHDC1Q9NTX5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
ECHDC1Q9NTX5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ECHDC1Q9NTX5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms