Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.86■■□□□ 1.41
CISHQ9NSE2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.86■■□□□ 1.41
CISHQ9NSE2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.86■■□□□ 1.41
CISHQ9NSE2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CISHQ9NSE2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
CISHQ9NSE2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CISHQ9NSE2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CISHQ9NSE2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.85■■□□□ 1.41
CISHQ9NSE2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.85■■□□□ 1.41
CISHQ9NSE2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CISHQ9NSE2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CISHQ9NSE2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CISHQ9NSE2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CISHQ9NSE2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CISHQ9NSE2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.84■■□□□ 1.41
CISHQ9NSE2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 AC008406.3-201ENST00000620001 1374 ntBASIC23.84■■□□□ 1.41
CISHQ9NSE2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.84■■□□□ 1.41
CISHQ9NSE2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.84■■□□□ 1.41
CISHQ9NSE2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CISHQ9NSE2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CISHQ9NSE2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.83■■□□□ 1.41
CISHQ9NSE2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CISHQ9NSE2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
CISHQ9NSE2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.83■■□□□ 1.41
CISHQ9NSE2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CISHQ9NSE2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CISHQ9NSE2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CISHQ9NSE2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CISHQ9NSE2 AC006455.2-201ENST00000429931 906 ntBASIC23.83■■□□□ 1.41
CISHQ9NSE2 AC009086.3-201ENST00000623486 1008 ntBASIC23.83■■□□□ 1.41
CISHQ9NSE2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.4
CISHQ9NSE2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CISHQ9NSE2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
CISHQ9NSE2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CISHQ9NSE2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CISHQ9NSE2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CISHQ9NSE2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.82■■□□□ 1.4
CISHQ9NSE2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.82■■□□□ 1.4
CISHQ9NSE2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CISHQ9NSE2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CISHQ9NSE2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 C9orf163-202ENST00000624034 2573 ntBASIC23.81■■□□□ 1.4
CISHQ9NSE2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
CISHQ9NSE2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CISHQ9NSE2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.8■■□□□ 1.4
CISHQ9NSE2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.8■■□□□ 1.4
CISHQ9NSE2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CISHQ9NSE2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.8■■□□□ 1.4
CISHQ9NSE2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CISHQ9NSE2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.8■■□□□ 1.4
CISHQ9NSE2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CISHQ9NSE2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CISHQ9NSE2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.79■■□□□ 1.4
CISHQ9NSE2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.79■■□□□ 1.4
CISHQ9NSE2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.79■■□□□ 1.4
CISHQ9NSE2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CISHQ9NSE2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.79■■□□□ 1.4
CISHQ9NSE2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.79■■□□□ 1.4
CISHQ9NSE2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
CISHQ9NSE2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CISHQ9NSE2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.77■■□□□ 1.4
CISHQ9NSE2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.77■■□□□ 1.4
CISHQ9NSE2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CISHQ9NSE2 AC092171.4-201ENST00000609130 632 ntBASIC23.77■■□□□ 1.4
CISHQ9NSE2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CISHQ9NSE2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.77■■□□□ 1.4
CISHQ9NSE2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CISHQ9NSE2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 AL499627.2-201ENST00000606283 725 ntBASIC23.76■■□□□ 1.39
CISHQ9NSE2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
CISHQ9NSE2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.75■■□□□ 1.39
CISHQ9NSE2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CISHQ9NSE2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CISHQ9NSE2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CISHQ9NSE2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms