Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 AC090340.1-201ENST00000620778 4980 ntBASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
CDC42SE1Q9NRR8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.55
CDC42SE1Q9NRR8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CDC42SE1Q9NRR8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 BCL2-203ENST00000589955 5011 ntBASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC42SE1Q9NRR8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CDC42SE1Q9NRR8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms