Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC009102.2-201ENST00000606772 1639 ntBASIC22.37■■□□□ 1.17
MRM3Q9HC36 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MRM3Q9HC36 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MRM3Q9HC36 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 TSPY9P-201ENST00000440215 945 ntBASIC22.36■■□□□ 1.17
MRM3Q9HC36 TSPY11P-201ENST00000442607 1045 ntBASIC22.36■■□□□ 1.17
MRM3Q9HC36 DUX4L4-201ENST00000566884 1269 ntBASIC22.36■■□□□ 1.17
MRM3Q9HC36 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
MRM3Q9HC36 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MRM3Q9HC36 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.35■■□□□ 1.17
MRM3Q9HC36 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.35■■□□□ 1.17
MRM3Q9HC36 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.35■■□□□ 1.17
MRM3Q9HC36 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.35■■□□□ 1.17
MRM3Q9HC36 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.35■■□□□ 1.17
MRM3Q9HC36 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MRM3Q9HC36 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.34■■□□□ 1.17
MRM3Q9HC36 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MRM3Q9HC36 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MRM3Q9HC36 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.33■■□□□ 1.17
MRM3Q9HC36 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MRM3Q9HC36 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MRM3Q9HC36 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
MRM3Q9HC36 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.33■■□□□ 1.17
MRM3Q9HC36 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.33■■□□□ 1.17
MRM3Q9HC36 UNC93B8-201ENST00000511903 705 ntBASIC22.33■■□□□ 1.17
MRM3Q9HC36 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MRM3Q9HC36 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MRM3Q9HC36 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
MRM3Q9HC36 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
MRM3Q9HC36 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
MRM3Q9HC36 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
MRM3Q9HC36 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MRM3Q9HC36 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MRM3Q9HC36 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.32■■□□□ 1.16
MRM3Q9HC36 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MRM3Q9HC36 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MRM3Q9HC36 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
MRM3Q9HC36 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.32■■□□□ 1.16
MRM3Q9HC36 MIR6724-1-201ENST00000616420 92 ntBASIC22.32■■□□□ 1.16
MRM3Q9HC36 MIR6724-2-201ENST00000616483 92 ntBASIC22.32■■□□□ 1.16
MRM3Q9HC36 MIR6724-4-201ENST00000617390 92 ntBASIC22.32■■□□□ 1.16
MRM3Q9HC36 MIR6724-3-201ENST00000622482 92 ntBASIC22.32■■□□□ 1.16
MRM3Q9HC36 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
MRM3Q9HC36 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 GUSBP5-201ENST00000418136 578 ntBASIC22.31■■□□□ 1.16
MRM3Q9HC36 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
MRM3Q9HC36 C17orf82-201ENST00000623772 1530 ntBASIC22.31■■□□□ 1.16
MRM3Q9HC36 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MRM3Q9HC36 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 AC127496.7-201ENST00000625110 1798 ntBASIC22.3■■□□□ 1.16
MRM3Q9HC36 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
MRM3Q9HC36 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.3■■□□□ 1.16
MRM3Q9HC36 AC009086.3-201ENST00000623486 1008 ntBASIC22.3■■□□□ 1.16
MRM3Q9HC36 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MRM3Q9HC36 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MRM3Q9HC36 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms