Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCNX3Q9H6A9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.33■□□□□ 0.84
PCNX3Q9H6A9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCNX3Q9H6A9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.33■□□□□ 0.84
PCNX3Q9H6A9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCNX3Q9H6A9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
PCNX3Q9H6A9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCNX3Q9H6A9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCNX3Q9H6A9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCNX3Q9H6A9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.29■□□□□ 0.84
PCNX3Q9H6A9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 SERBP1P1-201ENST00000396021 1160 ntBASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 AC245100.8-202ENST00000629247 1058 ntBASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
PCNX3Q9H6A9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX3Q9H6A9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.27■□□□□ 0.83
PCNX3Q9H6A9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCNX3Q9H6A9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCNX3Q9H6A9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 AL353803.4-201ENST00000565882 1934 ntBASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 AC096631.2-201ENST00000436136 790 ntBASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 DUX4L19-201ENST00000557448 1267 ntBASIC20.26■□□□□ 0.83
PCNX3Q9H6A9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX3Q9H6A9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms