Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBB1Q9H4B7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TUBB1Q9H4B7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 AC137630.3-201ENST00000607245 391 ntBASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBB1Q9H4B7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 AC144652.1-201ENST00000609974 1624 ntBASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBB1Q9H4B7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.52■■□□□ 1.04
TUBB1Q9H4B7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TUBB1Q9H4B7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 AC139530.1-201ENST00000575312 1977 ntBASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TUBB1Q9H4B7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 YBX1P4-201ENST00000392794 808 ntBASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBB1Q9H4B7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBB1Q9H4B7 AC087742.1-201ENST00000575880 1738 ntBASIC21.49■■□□□ 1.03
TUBB1Q9H4B7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms