Protein–RNA interactions for Protein: Q9H2M9

RAB3GAP2, Rab3 GTPase-activating protein non-catalytic subunit, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2Q9H2M9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC33.24■■■□□ 2.91
RAB3GAP2Q9H2M9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
RAB3GAP2Q9H2M9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 AL499627.2-201ENST00000606283 725 ntBASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RAB3GAP2Q9H2M9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
RAB3GAP2Q9H2M9 UNC93B3-201ENST00000308076 687 ntBASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 pRNA.6-201ENST00000610482 90 ntBASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 pRNA.5-201ENST00000612139 90 ntBASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 pRNA.11-201ENST00000618423 90 ntBASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 pRNA.13-201ENST00000619112 90 ntBASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 SF1-220ENST00000626028 704 ntTSL 2 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC33.21■■■□□ 2.91
RAB3GAP2Q9H2M9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
RAB3GAP2Q9H2M9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC33.2■■■□□ 2.91
RAB3GAP2Q9H2M9 SYT6-210ENST00000641643 1587 ntBASIC33.2■■■□□ 2.91
RAB3GAP2Q9H2M9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RAB3GAP2Q9H2M9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RAB3GAP2Q9H2M9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
RAB3GAP2Q9H2M9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
RAB3GAP2Q9H2M9 AC092171.4-201ENST00000609130 632 ntBASIC33.2■■■□□ 2.9
RAB3GAP2Q9H2M9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
RAB3GAP2Q9H2M9 DUSP8P5-201ENST00000422884 1815 ntBASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 AC024257.2-201ENST00000549699 147 ntBASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
RAB3GAP2Q9H2M9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 DUX4L19-201ENST00000557448 1267 ntBASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 AL136162.1-201ENST00000607711 1078 ntBASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RAB3GAP2Q9H2M9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 AC011298.3-201ENST00000615796 283 ntBASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC33.16■■■□□ 2.9
RAB3GAP2Q9H2M9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 AL138724.1-201ENST00000606771 1088 ntBASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RAB3GAP2Q9H2M9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.14■■■□□ 2.9
RAB3GAP2Q9H2M9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC33.14■■■□□ 2.9
RAB3GAP2Q9H2M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RAB3GAP2Q9H2M9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RAB3GAP2Q9H2M9 AL139246.5-201ENST00000606645 996 ntBASIC33.14■■■□□ 2.9
RAB3GAP2Q9H2M9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 AC136469.2-201ENST00000623944 1028 ntBASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 AC135279.3-201ENST00000610945 1311 ntBASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
RAB3GAP2Q9H2M9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
RAB3GAP2Q9H2M9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
RAB3GAP2Q9H2M9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAB3GAP2Q9H2M9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.12■■■□□ 2.89
RAB3GAP2Q9H2M9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms