Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS33BQ9H267 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.27■■□□□ 1.96
VPS33BQ9H267 AC145676.1-201ENST00000514988 2004 ntBASIC27.26■■□□□ 1.95
VPS33BQ9H267 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VPS33BQ9H267 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
VPS33BQ9H267 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VPS33BQ9H267 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VPS33BQ9H267 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.26■■□□□ 1.95
VPS33BQ9H267 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VPS33BQ9H267 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.26■■□□□ 1.95
VPS33BQ9H267 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.26■■□□□ 1.95
VPS33BQ9H267 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
VPS33BQ9H267 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
VPS33BQ9H267 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
VPS33BQ9H267 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS33BQ9H267 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS33BQ9H267 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS33BQ9H267 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
VPS33BQ9H267 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
VPS33BQ9H267 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS33BQ9H267 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS33BQ9H267 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS33BQ9H267 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.24■■□□□ 1.95
VPS33BQ9H267 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS33BQ9H267 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
VPS33BQ9H267 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.23■■□□□ 1.95
VPS33BQ9H267 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 CDCA4P2-201ENST00000441182 718 ntBASIC27.23■■□□□ 1.95
VPS33BQ9H267 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.23■■□□□ 1.95
VPS33BQ9H267 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.23■■□□□ 1.95
VPS33BQ9H267 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS33BQ9H267 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS33BQ9H267 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS33BQ9H267 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS33BQ9H267 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS33BQ9H267 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
VPS33BQ9H267 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.22■■□□□ 1.95
VPS33BQ9H267 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.22■■□□□ 1.95
VPS33BQ9H267 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.22■■□□□ 1.95
VPS33BQ9H267 TPRG1LP1-201ENST00000598702 760 ntBASIC27.22■■□□□ 1.95
VPS33BQ9H267 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS33BQ9H267 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS33BQ9H267 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS33BQ9H267 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS33BQ9H267 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.21■■□□□ 1.95
VPS33BQ9H267 AC016769.1-201ENST00000409132 1010 ntBASIC27.21■■□□□ 1.95
VPS33BQ9H267 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
VPS33BQ9H267 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.21■■□□□ 1.95
VPS33BQ9H267 KRT18P61-201ENST00000585825 1298 ntBASIC27.21■■□□□ 1.95
VPS33BQ9H267 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
VPS33BQ9H267 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.21■■□□□ 1.95
VPS33BQ9H267 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
VPS33BQ9H267 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.2■■□□□ 1.95
VPS33BQ9H267 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.2■■□□□ 1.95
VPS33BQ9H267 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.2■■□□□ 1.94
VPS33BQ9H267 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
VPS33BQ9H267 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.2■■□□□ 1.94
VPS33BQ9H267 AC137761.2-201ENST00000561729 223 ntBASIC27.2■■□□□ 1.94
VPS33BQ9H267 AC145350.3-201ENST00000569033 163 ntBASIC27.2■■□□□ 1.94
VPS33BQ9H267 LINC01529-204ENST00000636474 1715 ntBASIC27.2■■□□□ 1.94
VPS33BQ9H267 AC073111.5-205ENST00000641717 521 ntBASIC27.2■■□□□ 1.94
VPS33BQ9H267 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
VPS33BQ9H267 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.2■■□□□ 1.94
VPS33BQ9H267 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.19■■□□□ 1.94
VPS33BQ9H267 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
VPS33BQ9H267 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
VPS33BQ9H267 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
VPS33BQ9H267 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
VPS33BQ9H267 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.18■■□□□ 1.94
VPS33BQ9H267 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.18■■□□□ 1.94
VPS33BQ9H267 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
VPS33BQ9H267 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
VPS33BQ9H267 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
VPS33BQ9H267 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
VPS33BQ9H267 AC144652.1-201ENST00000609974 1624 ntBASIC27.17■■□□□ 1.94
VPS33BQ9H267 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.17■■□□□ 1.94
VPS33BQ9H267 AC026185.1-201ENST00000445748 174 ntBASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms