Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 AL353803.4-201ENST00000565882 1934 ntBASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUCKS1Q9H1E3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 KRT125P-201ENST00000546827 989 ntBASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.13■■□□□ 1.45
NUCKS1Q9H1E3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 AC242852.2-201ENST00000615738 1807 ntBASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 SNX5-217ENST00000606557 1087 ntBASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 AC021242.3-201ENST00000607598 1377 ntBASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NUCKS1Q9H1E3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 MIR4787-201ENST00000607364 84 ntBASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.11■■□□□ 1.45
NUCKS1Q9H1E3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NUCKS1Q9H1E3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 AC144652.1-201ENST00000609974 1624 ntBASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NUCKS1Q9H1E3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.08■■□□□ 1.45
NUCKS1Q9H1E3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NUCKS1Q9H1E3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NUCKS1Q9H1E3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
NUCKS1Q9H1E3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms