Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 AC005332.8-201ENST00000622750 2735 ntBASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 AFG3L1P-217ENST00000557444 2447 ntBASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYSTM1Q9H1C7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.14□□□□□ -0.31
CYSTM1Q9H1C7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 AC098818.2-201ENST00000564925 2320 ntBASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.13□□□□□ -0.31
CYSTM1Q9H1C7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CYSTM1Q9H1C7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.11□□□□□ -0.31
CYSTM1Q9H1C7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms