Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD4Q9H0A8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.64■□□□□ 0.74
COMMD4Q9H0A8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 KRT18P60-201ENST00000312876 1297 ntBASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COMMD4Q9H0A8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
COMMD4Q9H0A8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD4Q9H0A8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD4Q9H0A8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 AC120024.1-201ENST00000562672 995 ntBASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 NTF6A-201ENST00000591175 560 ntBASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD4Q9H0A8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD4Q9H0A8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD4Q9H0A8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD4Q9H0A8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD4Q9H0A8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.58■□□□□ 0.73
COMMD4Q9H0A8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.58■□□□□ 0.73
COMMD4Q9H0A8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms