Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
STRADBQ9C0K7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.33■■□□□ 1.01
STRADBQ9C0K7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.33■■□□□ 1.01
STRADBQ9C0K7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STRADBQ9C0K7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STRADBQ9C0K7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
STRADBQ9C0K7 AC010525.1-201ENST00000585559 441 ntBASIC21.33■■□□□ 1.01
STRADBQ9C0K7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
STRADBQ9C0K7 AC022211.4-201ENST00000625094 2161 ntBASIC21.33■■□□□ 1
STRADBQ9C0K7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.32■■□□□ 1
STRADBQ9C0K7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.32■■□□□ 1
STRADBQ9C0K7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.32■■□□□ 1
STRADBQ9C0K7 KRT18P14-201ENST00000534205 1250 ntBASIC21.32■■□□□ 1
STRADBQ9C0K7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.32■■□□□ 1
STRADBQ9C0K7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
STRADBQ9C0K7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.31■■□□□ 1
STRADBQ9C0K7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.31■■□□□ 1
STRADBQ9C0K7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.31■■□□□ 1
STRADBQ9C0K7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.31■■□□□ 1
STRADBQ9C0K7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
STRADBQ9C0K7 NTF6G-201ENST00000591094 616 ntBASIC21.31■■□□□ 1
STRADBQ9C0K7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.31■■□□□ 1
STRADBQ9C0K7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.31■■□□□ 1
STRADBQ9C0K7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.3■■□□□ 1
STRADBQ9C0K7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 LINC01529-204ENST00000636474 1715 ntBASIC21.3■■□□□ 1
STRADBQ9C0K7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.3■■□□□ 1
STRADBQ9C0K7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.3■■□□□ 1
STRADBQ9C0K7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.3■■□□□ 1
STRADBQ9C0K7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.3■■□□□ 1
STRADBQ9C0K7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.3■■□□□ 1
STRADBQ9C0K7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.3■■□□□ 1
STRADBQ9C0K7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.3■■□□□ 1
STRADBQ9C0K7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.29■■□□□ 1
STRADBQ9C0K7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
STRADBQ9C0K7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.29■■□□□ 1
STRADBQ9C0K7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.29■■□□□ 1
STRADBQ9C0K7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 AC004911.1-201ENST00000416316 871 ntBASIC21.29■■□□□ 1
STRADBQ9C0K7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 AC144652.1-201ENST00000609974 1624 ntBASIC21.29■■□□□ 1
STRADBQ9C0K7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
STRADBQ9C0K7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
STRADBQ9C0K7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.28■■□□□ 1
STRADBQ9C0K7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
STRADBQ9C0K7 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.28■■□□□ 1
STRADBQ9C0K7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.28■■□□□ 1
STRADBQ9C0K7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 TERF1P2-201ENST00000583350 1212 ntBASIC21.28■■□□□ 1
STRADBQ9C0K7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
STRADBQ9C0K7 AC092437.1-201ENST00000624794 1048 ntBASIC21.28■■□□□ 1
STRADBQ9C0K7 AC105233.4-201ENST00000642045 216 ntBASIC21.28■■□□□ 1
STRADBQ9C0K7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.28■■□□□ 1
STRADBQ9C0K7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STRADBQ9C0K7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STRADBQ9C0K7 AC135731.1-201ENST00000569415 2548 ntBASIC21.27■■□□□ 1
STRADBQ9C0K7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STRADBQ9C0K7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STRADBQ9C0K7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.27■■□□□ 1
STRADBQ9C0K7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
STRADBQ9C0K7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.27■■□□□ 1
STRADBQ9C0K7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.27■■□□□ 1
STRADBQ9C0K7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms