Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEC22CQ9BRL7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
SEC22CQ9BRL7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 AC092667.1-201ENST00000434301 2586 ntBASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC22CQ9BRL7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEC22CQ9BRL7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEC22CQ9BRL7 AC080038.3-201ENST00000623346 1952 ntBASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 MIR3960-201ENST00000583311 91 ntBASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC22CQ9BRL7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 AL391422.3-201ENST00000603791 2761 ntBASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 AL162393.1-201ENST00000437852 946 ntBASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 AC025884.2-201ENST00000553429 711 ntBASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 AC005229.4-201ENST00000610085 2198 ntBASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC22CQ9BRL7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC22CQ9BRL7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 FAM99A-202ENST00000538190 1989 ntBASIC18.79■□□□□ 0.6
SEC22CQ9BRL7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SEC22CQ9BRL7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC22CQ9BRL7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.78■□□□□ 0.6
SEC22CQ9BRL7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.78■□□□□ 0.6
SEC22CQ9BRL7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC22CQ9BRL7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms