Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A4EQ96PG1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A4EQ96PG1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A4EQ96PG1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A4EQ96PG1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A4EQ96PG1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MS4A4EQ96PG1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MS4A4EQ96PG1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A4EQ96PG1 C17orf82-201ENST00000623772 1530 ntBASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A4EQ96PG1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 C1orf229-201ENST00000623686 2258 ntBASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.77■□□□□ 0.92
MS4A4EQ96PG1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A4EQ96PG1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 DUX4L4-201ENST00000566884 1269 ntBASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A4EQ96PG1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 AL117332.1-201ENST00000622628 974 ntBASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A4EQ96PG1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MS4A4EQ96PG1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MS4A4EQ96PG1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.74■□□□□ 0.91
MS4A4EQ96PG1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MS4A4EQ96PG1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 AC009086.3-201ENST00000623486 1008 ntBASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
MS4A4EQ96PG1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms