Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 AC021242.3-201ENST00000607598 1377 ntBASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
FOXN4Q96NZ1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 UNC93B8-201ENST00000511903 705 ntBASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN4Q96NZ1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXN4Q96NZ1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 KRT16P3-201ENST00000439127 1283 ntBASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 TSPY9P-201ENST00000440215 945 ntBASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 TSPY11P-201ENST00000442607 1045 ntBASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN4Q96NZ1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 AC233723.2-201ENST00000623798 2106 ntBASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN4Q96NZ1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 AC008406.3-201ENST00000620001 1374 ntBASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN4Q96NZ1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
FOXN4Q96NZ1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 AL353803.4-201ENST00000565882 1934 ntBASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN4Q96NZ1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN4Q96NZ1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXN4Q96NZ1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN4Q96NZ1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN4Q96NZ1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXN4Q96NZ1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN4Q96NZ1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms