Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC142381.3-201ENST00000568208 1670 ntBASIC21.43■■□□□ 1.02
RNF31Q96EP0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF31Q96EP0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF31Q96EP0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RNF31Q96EP0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF31Q96EP0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF31Q96EP0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF31Q96EP0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF31Q96EP0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF31Q96EP0 AC087623.3-201ENST00000607047 1098 ntBASIC21.42■■□□□ 1.02
RNF31Q96EP0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF31Q96EP0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF31Q96EP0 AP003733.4-201ENST00000623785 1697 ntBASIC21.42■■□□□ 1.02
RNF31Q96EP0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF31Q96EP0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RNF31Q96EP0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF31Q96EP0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF31Q96EP0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF31Q96EP0 AC027682.1-201ENST00000562846 899 ntBASIC21.41■■□□□ 1.02
RNF31Q96EP0 AC011298.3-201ENST00000615796 283 ntBASIC21.41■■□□□ 1.02
RNF31Q96EP0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF31Q96EP0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF31Q96EP0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF31Q96EP0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF31Q96EP0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF31Q96EP0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF31Q96EP0 RASA4CP-201ENST00000424092 1398 ntBASIC21.4■■□□□ 1.02
RNF31Q96EP0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF31Q96EP0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
RNF31Q96EP0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF31Q96EP0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.4■■□□□ 1.02
RNF31Q96EP0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF31Q96EP0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF31Q96EP0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF31Q96EP0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF31Q96EP0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF31Q96EP0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF31Q96EP0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF31Q96EP0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RNF31Q96EP0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RNF31Q96EP0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF31Q96EP0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF31Q96EP0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF31Q96EP0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF31Q96EP0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF31Q96EP0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF31Q96EP0 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 AC136469.2-201ENST00000623944 1028 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 AC241377.3-202ENST00000626088 1088 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 AC241585.3-202ENST00000628937 1088 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 AC245100.8-202ENST00000629247 1058 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.38■■□□□ 1.01
RNF31Q96EP0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 LINC01124-201ENST00000409786 2117 ntBASIC21.37■■□□□ 1.01
RNF31Q96EP0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RNF31Q96EP0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF31Q96EP0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RNF31Q96EP0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF31Q96EP0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF31Q96EP0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF31Q96EP0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
RNF31Q96EP0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF31Q96EP0 AC012676.1-201ENST00000574705 1949 ntBASIC21.35■■□□□ 1.01
RNF31Q96EP0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RNF31Q96EP0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.35■■□□□ 1.01
RNF31Q96EP0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 MIR5787-201ENST00000611784 55 ntBASIC21.35■■□□□ 1.01
RNF31Q96EP0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms