Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC006455.2-201ENST00000429931 906 ntBASIC19.99■□□□□ 0.79
CPNE4Q96A23 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CPNE4Q96A23 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CPNE4Q96A23 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE4Q96A23 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE4Q96A23 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
CPNE4Q96A23 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE4Q96A23 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE4Q96A23 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CPNE4Q96A23 SERBP1P1-201ENST00000396021 1160 ntBASIC19.98■□□□□ 0.79
CPNE4Q96A23 AL136162.1-201ENST00000607711 1078 ntBASIC19.98■□□□□ 0.79
CPNE4Q96A23 AC110285.6-201ENST00000617652 491 ntBASIC19.98■□□□□ 0.79
CPNE4Q96A23 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE4Q96A23 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CPNE4Q96A23 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.98■□□□□ 0.79
CPNE4Q96A23 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 AC092068.2-201ENST00000590491 1708 ntBASIC19.97■□□□□ 0.79
CPNE4Q96A23 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE4Q96A23 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 AC011298.3-201ENST00000615796 283 ntBASIC19.97■□□□□ 0.79
CPNE4Q96A23 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CPNE4Q96A23 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CPNE4Q96A23 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 AC135279.3-201ENST00000610945 1311 ntBASIC19.97■□□□□ 0.79
CPNE4Q96A23 ANOS2P-203ENST00000472227 1816 ntBASIC19.97■□□□□ 0.79
CPNE4Q96A23 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE4Q96A23 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE4Q96A23 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE4Q96A23 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE4Q96A23 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE4Q96A23 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 pRNA.6-201ENST00000610482 90 ntBASIC19.96■□□□□ 0.79
CPNE4Q96A23 pRNA.5-201ENST00000612139 90 ntBASIC19.96■□□□□ 0.79
CPNE4Q96A23 AC106739.1-201ENST00000617035 715 ntBASIC19.96■□□□□ 0.79
CPNE4Q96A23 pRNA.11-201ENST00000618423 90 ntBASIC19.96■□□□□ 0.79
CPNE4Q96A23 pRNA.13-201ENST00000619112 90 ntBASIC19.96■□□□□ 0.79
CPNE4Q96A23 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPNE4Q96A23 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CPNE4Q96A23 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.95■□□□□ 0.78
CPNE4Q96A23 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE4Q96A23 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE4Q96A23 PBX2P1-201ENST00000493219 1291 ntBASIC19.95■□□□□ 0.78
CPNE4Q96A23 MIR3181-201ENST00000578512 73 ntBASIC19.95■□□□□ 0.78
CPNE4Q96A23 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE4Q96A23 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.95■□□□□ 0.78
CPNE4Q96A23 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE4Q96A23 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE4Q96A23 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE4Q96A23 AL353803.4-201ENST00000565882 1934 ntBASIC19.94■□□□□ 0.78
CPNE4Q96A23 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE4Q96A23 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE4Q96A23 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE4Q96A23 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.94■□□□□ 0.78
CPNE4Q96A23 AC133561.4-201ENST00000566112 224 ntBASIC19.94■□□□□ 0.78
CPNE4Q96A23 AL499627.2-201ENST00000606283 725 ntBASIC19.94■□□□□ 0.78
CPNE4Q96A23 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CPNE4Q96A23 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE4Q96A23 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE4Q96A23 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 AC024257.2-201ENST00000549699 147 ntBASIC19.93■□□□□ 0.78
CPNE4Q96A23 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE4Q96A23 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CPNE4Q96A23 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms