Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9Q92623 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9Q92623 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9Q92623 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TTC9Q92623 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TTC9Q92623 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9Q92623 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TTC9Q92623 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC9Q92623 AL161729.1-201ENST00000604104 1402 ntBASIC21.22■□□□□ 0.99
TTC9Q92623 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC9Q92623 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC9Q92623 AC123595.1-201ENST00000440769 1046 ntBASIC21.22■□□□□ 0.99
TTC9Q92623 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC9Q92623 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC9Q92623 AC009102.2-201ENST00000606772 1639 ntBASIC21.22■□□□□ 0.99
TTC9Q92623 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC9Q92623 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC9Q92623 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC9Q92623 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 AC241377.3-202ENST00000626088 1088 ntBASIC21.21■□□□□ 0.99
TTC9Q92623 AC241585.3-202ENST00000628937 1088 ntBASIC21.21■□□□□ 0.99
TTC9Q92623 AC245100.8-202ENST00000629247 1058 ntBASIC21.21■□□□□ 0.99
TTC9Q92623 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC9Q92623 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9Q92623 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9Q92623 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TTC9Q92623 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9Q92623 AC027612.3-201ENST00000413684 1047 ntBASIC21.2■□□□□ 0.98
TTC9Q92623 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TTC9Q92623 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.2■□□□□ 0.98
TTC9Q92623 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC9Q92623 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC9Q92623 AL022069.1-201ENST00000568025 1636 ntBASIC21.19■□□□□ 0.98
TTC9Q92623 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC9Q92623 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.19■□□□□ 0.98
TTC9Q92623 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC9Q92623 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.19■□□□□ 0.98
TTC9Q92623 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.19■□□□□ 0.98
TTC9Q92623 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TTC9Q92623 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC9Q92623 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC9Q92623 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.18■□□□□ 0.98
TTC9Q92623 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.18■□□□□ 0.98
TTC9Q92623 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC9Q92623 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.18■□□□□ 0.98
TTC9Q92623 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.18■□□□□ 0.98
TTC9Q92623 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TTC9Q92623 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC9Q92623 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC9Q92623 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC9Q92623 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 AC006455.2-201ENST00000429931 906 ntBASIC21.17■□□□□ 0.98
TTC9Q92623 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.17■□□□□ 0.98
TTC9Q92623 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.17■□□□□ 0.98
TTC9Q92623 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 C17orf82-201ENST00000623772 1530 ntBASIC21.17■□□□□ 0.98
TTC9Q92623 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9Q92623 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TTC9Q92623 AC131274.2-201ENST00000580697 1507 ntBASIC21.16■□□□□ 0.98
TTC9Q92623 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.16■□□□□ 0.98
TTC9Q92623 AL358852.1-201ENST00000623174 1268 ntBASIC21.16■□□□□ 0.98
TTC9Q92623 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9Q92623 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TTC9Q92623 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.15■□□□□ 0.98
TTC9Q92623 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.15■□□□□ 0.98
TTC9Q92623 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC9Q92623 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC9Q92623 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC9Q92623 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC9Q92623 MIR3181-201ENST00000578512 73 ntBASIC21.15■□□□□ 0.98
TTC9Q92623 AC126544.1-201ENST00000580842 1059 ntBASIC21.15■□□□□ 0.98
TTC9Q92623 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.15■□□□□ 0.98
TTC9Q92623 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms