Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT9Q92600 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT9Q92600 AC144652.1-201ENST00000609974 1624 ntBASIC20.53■□□□□ 0.88
CNOT9Q92600 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT9Q92600 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT9Q92600 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
CNOT9Q92600 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNOT9Q92600 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CNOT9Q92600 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT9Q92600 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT9Q92600 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.52■□□□□ 0.88
CNOT9Q92600 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT9Q92600 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.52■□□□□ 0.88
CNOT9Q92600 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.52■□□□□ 0.88
CNOT9Q92600 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT9Q92600 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CNOT9Q92600 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNOT9Q92600 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT9Q92600 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT9Q92600 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT9Q92600 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.51■□□□□ 0.87
CNOT9Q92600 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT9Q92600 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CNOT9Q92600 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT9Q92600 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT9Q92600 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT9Q92600 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
CNOT9Q92600 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CNOT9Q92600 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.5■□□□□ 0.87
CNOT9Q92600 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT9Q92600 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CNOT9Q92600 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
CNOT9Q92600 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT9Q92600 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT9Q92600 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT9Q92600 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNOT9Q92600 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.49■□□□□ 0.87
CNOT9Q92600 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT9Q92600 AC009102.2-201ENST00000606772 1639 ntBASIC20.49■□□□□ 0.87
CNOT9Q92600 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CNOT9Q92600 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CNOT9Q92600 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT9Q92600 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CNOT9Q92600 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT9Q92600 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CNOT9Q92600 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT9Q92600 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.48■□□□□ 0.87
CNOT9Q92600 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.47■□□□□ 0.87
CNOT9Q92600 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.47■□□□□ 0.87
CNOT9Q92600 MIR6724-1-201ENST00000616420 92 ntBASIC20.47■□□□□ 0.87
CNOT9Q92600 MIR6724-2-201ENST00000616483 92 ntBASIC20.47■□□□□ 0.87
CNOT9Q92600 MIR6724-4-201ENST00000617390 92 ntBASIC20.47■□□□□ 0.87
CNOT9Q92600 MIR6724-3-201ENST00000622482 92 ntBASIC20.47■□□□□ 0.87
CNOT9Q92600 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.47■□□□□ 0.87
CNOT9Q92600 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT9Q92600 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CNOT9Q92600 CLDN5-201ENST00000403084 2357 ntBASIC20.46■□□□□ 0.87
CNOT9Q92600 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNOT9Q92600 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT9Q92600 GUSBP5-201ENST00000418136 578 ntBASIC20.46■□□□□ 0.87
CNOT9Q92600 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CNOT9Q92600 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.46■□□□□ 0.87
CNOT9Q92600 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.46■□□□□ 0.87
CNOT9Q92600 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.46■□□□□ 0.87
CNOT9Q92600 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT9Q92600 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
CNOT9Q92600 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
CNOT9Q92600 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CNOT9Q92600 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT9Q92600 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT9Q92600 KRT16P3-201ENST00000439127 1283 ntBASIC20.45■□□□□ 0.86
CNOT9Q92600 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.45■□□□□ 0.86
CNOT9Q92600 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.45■□□□□ 0.86
CNOT9Q92600 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.45■□□□□ 0.86
CNOT9Q92600 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.45■□□□□ 0.86
CNOT9Q92600 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.45■□□□□ 0.86
CNOT9Q92600 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT9Q92600 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT9Q92600 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT9Q92600 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms