Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
AP3S1Q92572 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
AP3S1Q92572 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S1Q92572 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
AP3S1Q92572 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
AP3S1Q92572 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.65■□□□□ 0.74
AP3S1Q92572 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3S1Q92572 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 SMPD5-203ENST00000639008 1464 ntBASIC19.65■□□□□ 0.74
AP3S1Q92572 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S1Q92572 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
AP3S1Q92572 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
AP3S1Q92572 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP3S1Q92572 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
AP3S1Q92572 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S1Q92572 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S1Q92572 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.64■□□□□ 0.73
AP3S1Q92572 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S1Q92572 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.63■□□□□ 0.73
AP3S1Q92572 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
AP3S1Q92572 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3S1Q92572 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.63■□□□□ 0.73
AP3S1Q92572 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S1Q92572 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3S1Q92572 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
AP3S1Q92572 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S1Q92572 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S1Q92572 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.62■□□□□ 0.73
AP3S1Q92572 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S1Q92572 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
AP3S1Q92572 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP3S1Q92572 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.62■□□□□ 0.73
AP3S1Q92572 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.62■□□□□ 0.73
AP3S1Q92572 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
AP3S1Q92572 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S1Q92572 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S1Q92572 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
AP3S1Q92572 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
AP3S1Q92572 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S1Q92572 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S1Q92572 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S1Q92572 AC026310.3-201ENST00000625186 2373 ntBASIC19.61■□□□□ 0.73
AP3S1Q92572 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AP3S1Q92572 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3S1Q92572 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3S1Q92572 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S1Q92572 AC090877.2-201ENST00000558441 1738 ntBASIC19.59■□□□□ 0.73
AP3S1Q92572 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP3S1Q92572 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP3S1Q92572 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3S1Q92572 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 AL022069.1-201ENST00000568025 1636 ntBASIC19.59■□□□□ 0.73
AP3S1Q92572 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP3S1Q92572 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.59■□□□□ 0.73
AP3S1Q92572 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S1Q92572 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AP3S1Q92572 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
AP3S1Q92572 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3S1Q92572 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.58■□□□□ 0.73
AP3S1Q92572 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.58■□□□□ 0.73
AP3S1Q92572 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3S1Q92572 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
AP3S1Q92572 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
AP3S1Q92572 AL121603.2-201ENST00000557373 2117 ntBASIC19.58■□□□□ 0.72
AP3S1Q92572 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3S1Q92572 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3S1Q92572 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
AP3S1Q92572 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3S1Q92572 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms