Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.02■■□□□ 1.12
RASGEF1AQ8N9B8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RASGEF1AQ8N9B8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RASGEF1AQ8N9B8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RASGEF1AQ8N9B8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.02■■□□□ 1.11
RASGEF1AQ8N9B8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 MIR3181-201ENST00000578512 73 ntBASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RASGEF1AQ8N9B8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 pRNA.6-201ENST00000610482 90 ntBASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 pRNA.5-201ENST00000612139 90 ntBASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 pRNA.11-201ENST00000618423 90 ntBASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 pRNA.13-201ENST00000619112 90 ntBASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22■■□□□ 1.11
RASGEF1AQ8N9B8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 AL136162.1-201ENST00000607711 1078 ntBASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RASGEF1AQ8N9B8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 AL499627.2-201ENST00000606283 725 ntBASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RASGEF1AQ8N9B8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 AL139246.5-201ENST00000606645 996 ntBASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RASGEF1AQ8N9B8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 AC024257.2-201ENST00000549699 147 ntBASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 AL138724.1-201ENST00000606771 1088 ntBASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.96■■□□□ 1.11
RASGEF1AQ8N9B8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 PBX2P1-201ENST00000493219 1291 ntBASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.95■■□□□ 1.1
RASGEF1AQ8N9B8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.94■■□□□ 1.1
RASGEF1AQ8N9B8 DUSP8P3-201ENST00000399571 1760 ntBASIC21.94■■□□□ 1.1
RASGEF1AQ8N9B8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RASGEF1AQ8N9B8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.94■■□□□ 1.1
RASGEF1AQ8N9B8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RASGEF1AQ8N9B8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms